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PKNCA Validation

Bill Denney

Source: vignettes/v60-PKNCA-validation.Rmd
v60-PKNCA-validation.Rmd

Introduction

To run the tests, the package must be installed with its tests:

  • To install from CRAN:
    • install.packages(pkgs="PKNCA", INSTALL_opts="--install-tests", type="source")
  • To install from GitHub:
    • library(devtools)
    • install_github("humanpred/pknca", INSTALL_opts="--install-tests")

Testing and validation that results match in a local environment compared to the original environment is an important part of confirmation that a package works as expected.

Re-running this vignette in your local environment will confirm that local results match those in the original package development. Test success is confirmed by the existence of no failed tests; warnings are expected during testing (and not shown in this vignette for that reason); and some tests may be skipped, but those are expected as well.

Summary of Testing

The following sentence is dynamically generated to summarize the testing results: Tests were not run because tests are not installed.

Session Information 

## [1] "2026-06-19"
## R version 4.6.0 (2026-04-24)
## Platform: x86_64-pc-linux-gnu
## Running under: Ubuntu 24.04.4 LTS
## 
## Matrix products: default
## BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
## LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so;  LAPACK version 3.12.0
## 
## locale:
##  [1] LC_CTYPE=C.UTF-8       LC_NUMERIC=C           LC_TIME=C.UTF-8       
##  [4] LC_COLLATE=C.UTF-8     LC_MONETARY=C.UTF-8    LC_MESSAGES=C.UTF-8   
##  [7] LC_PAPER=C.UTF-8       LC_NAME=C              LC_ADDRESS=C          
## [10] LC_TELEPHONE=C         LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C   
## 
## time zone: UTC
## tzcode source: system (glibc)
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
## [1] dplyr_1.2.1       testthat_3.3.2    knitr_1.51        PKNCA_0.12.1.9000
## 
## loaded via a namespace (and not attached):
##  [1] jsonlite_2.0.0    compiler_4.6.0    brio_1.1.5        tidyselect_1.2.1 
##  [5] Rcpp_1.1.1-1.1    jquerylib_0.1.4   systemfonts_1.3.2 textshaping_1.0.5
##  [9] yaml_2.3.12       fastmap_1.2.0     lattice_0.22-9    R6_2.6.1         
## [13] generics_0.1.4    tibble_3.3.1      desc_1.4.3        units_1.0-1      
## [17] bslib_0.11.0      pillar_1.11.1     rlang_1.2.0       cachem_1.1.0     
## [21] xfun_0.58         fs_2.1.0          sass_0.4.10       otel_0.2.0       
## [25] cli_3.6.6         pkgdown_2.2.0     magrittr_2.0.5    digest_0.6.39    
## [29] grid_4.6.0        lifecycle_1.0.5   nlme_3.1-169      vctrs_0.7.3      
## [33] evaluate_1.0.5    glue_1.8.1        ragg_1.5.2        rmarkdown_2.31   
## [37] tools_4.6.0       pkgconfig_2.0.3   htmltools_0.5.9